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Agents for Spatial Biology
Tailored to Vizgen, 10X, AtlasXOmics, Takara. Powered by Anthropic.
Oct 28, 2025
•
Kenny Workman
,
Hannah Le
,
Harihara Muralidharan
, and
Zhen Yang
29
2
3
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scBench: Can AI Agents Analyze Real-World Single-Cell Data?
394 verifiable problems across six sequencing platforms: 10X Chromium, BD Rhapsody, CSGenetics, Illumina, MissionBio, ParseBio
Feb 6
•
Kenny Workman
21
SpatialBench: Can Agents Analyze Real-World Spatial Biology Data?
first contribution towards a broader family of benchmarks spanning major data types // 146 verifiable problems spanning 5 spatial platforms and 7 task…
Dec 26, 2025
•
Kenny Workman
27
1
2
agent.bio
A public, interactive agent sandbox for five major spatial kit/machine types: Takara Seeker, Vizgen MERFISH, AtlasXOmics DBiT-seq, 10X Xenium + 10X…
Dec 9, 2025
•
Kenny Workman
and
Hannah Le
40
SpatialBench: real world tasks for spatial agents
98 dataset/eval packs across 4 spatial technologies // test harness, open formats and examples available on GitHub // eval banks as structured…
Nov 13, 2025
•
Kenny Workman
35
1
GDPR-Compliant Bioinformatics by Design
Patient rights and data integrity as defaults in an experimental analysis portal
Oct 14, 2025
•
Jordan Ramsay
31
Forch: Bring-Your-Own-Compute on Latch
Motivation, design and deployment details of a new compute orchestrator
Sep 19, 2025
•
Max Smolin
26
A New Spatial Epigenomics Data Portal
New datasets available to explore the spatial epigenetic landscape // created by AtlasXOmics' DBit-seq technology
Sep 12, 2025
•
Hannah Le
9
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